MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Staphylococcus warneri
19428wF1_P912
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 59
bases: 2,634,813 bps
CDS: 2,566
rRNA: 9
Repeat region:
tmRNA: 1
tRNA: 62
misc RNA:
Total features: 2,638
Total number of protein coding genes annotated/found:
2,566
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Items 1 - 20
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Molecule
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5024|JADGMF010000007.1
SEQF5024_02362
Genome Viewer
NA
AA
1047/349
229-1275
Tyrosine recombinase XerC
SEQF5024|JADGMF010000007.1
SEQF5024_02363
Genome Viewer
NA
AA
1173/391
1288-2460
7-carboxy-7-deazaguanine synthase
SEQF5024|JADGMF010000007.1
SEQF5024_02364
Genome Viewer
NA
AA
531/177
3110-2580
hypothetical protein
SEQF5024|JADGMF010000007.1
SEQF5024_02365
Genome Viewer
NA
AA
1242/414
4410-3169
Aminopeptidase PepS
SEQF5024|JADGMF010000007.1
SEQF5024_02366
Genome Viewer
NA
AA
204/68
4626-4423
hypothetical protein
SEQF5024|JADGMF010000007.1
SEQF5024_02367
Genome Viewer
NA
AA
465/155
4773-5237
Low molecular weight protein-tyrosine-phosphatase PtpA
SEQF5024|JADGMF010000007.1
SEQF5024_02368
Genome Viewer
NA
AA
285/95
5245-5529
hypothetical protein
SEQF5024|JADGMF010000007.1
SEQF5024_02369
Genome Viewer
NA
AA
1236/412
5759-6994
hypothetical protein
SEQF5024|JADGMF010000007.1
SEQF5024_02370
Genome Viewer
NA
AA
630/210
7682-7053
Response regulator protein VraR
SEQF5024|JADGMF010000007.1
SEQF5024_02371
Genome Viewer
NA
AA
1044/348
8715-7672
Sensor protein VraS
SEQF5024|JADGMF010000007.1
SEQF5024_02372
Genome Viewer
NA
AA
702/234
9413-8712
hypothetical protein
SEQF5024|JADGMF010000007.1
SEQF5024_02373
Genome Viewer
NA
AA
387/129
9814-9428
hypothetical protein
SEQF5024|JADGMF010000007.1
SEQF5024_02374
Genome Viewer
NA
AA
756/252
10713-9958
Methionine aminopeptidase
SEQF5024|JADGMF010000007.1
SEQF5024_02375
Genome Viewer
NA
AA
987/329
10880-11866
hypothetical protein
SEQF5024|JADGMF010000007.1
SEQF5024_02376
Genome Viewer
NA
AA
726/242
12659-11934
Lipid II isoglutaminyl synthase (glutamine-hydrolyzing) subunit GatD
SEQF5024|JADGMF010000007.1
SEQF5024_02377
Genome Viewer
NA
AA
1314/438
13972-12659
Lipid II isoglutaminyl synthase (glutamine-hydrolyzing) subunit MurT
SEQF5024|JADGMF010000007.1
SEQF5024_02378
Genome Viewer
NA
AA
501/167
14166-14666
Bacterial non-heme ferritin
SEQF5024|JADGMF010000007.1
SEQF5024_02379
Genome Viewer
NA
AA
555/185
14888-15442
Putative bifunctional exonuclease/endonuclease protein
SEQF5024|JADGMF010000007.1
SEQF5024_02380
Genome Viewer
NA
AA
1071/357
16545-15475
DNA polymerase IV
SEQF5024|JADGMF010000007.1
SEQF5024_02381
Genome Viewer
NA
AA
543/181
17229-16687
hypothetical protein
Items 1 - 20
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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